The Best Nonprofit Accounting Software for 2021

Are you looking to build your nonprofit organization?

Unlike other businesses, nonprofits don’t sell any services or products for profit. The main goal is to make activities that only benefit the public.

As a nonprofit organization, you need a way to keep track of finances, donations, and reports. You can manage and optimize finances and reports with accounting programs.

Here are some of the best nonprofit accounting software that you should try today.

Sage Intacct

Sage Intacct is one of the best nonprofit accounting software that many recommend. This software has a huge library of tools geared towards charitable organizations. Aside from bank reconciliation, it also has tools like:

  • Membership, fundraising, and dues management
  • Fund accounting
  • Financial reporting
  • Form 990 generation
  • Honest donation tracking

Sage Intacct also provides free seminars to help struggling nonprofit organizations. The only problem is that it’s expensive with no transparent pricing on their website. You’ll have to contact the company directly to get a quote.

Zoho Books

Zoho is a nonprofit accounting software that handles your automation. You can automate tasks and customize your workflow with Zoho. It also has tools that help with expense reports and fund tracking.

It also helps you set up alerts to streamline accounting processes. For example, a high donation triggers an automatic tax receipt with a thank you note.

A downside to Zoho is that it doesn’t offer a personal payroll solution. It also doesn’t integrate with third-party apps. Zoho plans start with $9 per month, but it has a 15% discount for nonprofit organizations.

NonProfit Plus

Nonprofit plus gives you the best of both non-profit and accounting features. You get to enjoy donor and board management with unlimited users. The encumbrance accounting feature allows for easier financial records tracking.

This software is extremely scalable. As your company grows bigger, you get more NonProfit plus features. NonProfit plus does not list any pricing, but customers state paying more than $600 per month.


Aplos is a church-specific and nonprofit software specializing in fund-based accounting. Going for Aplos Suite starts with $59 per month, but you have access to their tools such as:

  • Event registration
  • Fundraising campaign management
  • Customizable websites
  • Automated receipts, reminders, and emails

Although Aplos excels in nonprofit tools, its accounting focus needs more work. You’ll have to pay extra to get accounting software standard tools. This includes expense tracking, financial statements, and tax form generation.


Billsby is your software to power up your subscription-based business. It offers customizable and powerful billing apps to simplify your revenue operations.

This software does not get any money from you until you make about $10,000. Don’t believe us? Take a look at for the prices.

Invest In a Nonprofit Accounting Software

Getting automated help will give you enough time to manage your website and company. Feel free to try out any of the listed nonprofit accounting software. Do take your time to research each one to narrow down your choice.

Did you like our list of nonprofit accounting programs? Check out the rest of our guides with more of the best software for 2021.


Please enter your comment!
Please enter your name here